Might be of interest.
For YETI
Debabrata Phukon
---------- Forwarded message ---------
From: Mohan Patel <monapatelpgatti@xxxxxxxxx>
Date: Fri, Jan 22, 2021, 12:58 PM
Subject: Re: JRF positions in the area of molecular biology and
bioinformatics
To: YETI <meet.yeti@xxxxxxxxx>
*Dear Sir, *
Please share to the group
Regards
Mohan
*JRF positions available at TDU, Bengaluru-64*
*The University of Trans-Disciplinary Health Sciences and Technology (TDU)
Position: JRF (2 No.) and Forestry college, Sirsi, UAS, Dharwad (JRF 1) and
IWST (1) *
Interested can contact: *mohan.kumar@xxxxxxxxxx* <mohan.kumar@xxxxxxxxxx>
*Requirement: immediately *
Position: JRF (1 No.)
*Project1: Multi-omic approaches and mass spectrometry based tissue
metabolite imaging towards understanding metabolites localisation and
metabolic pathways in specific cell/tissues of key medicinal
plant, Dysoxylum binectariferum. *
*Eligibility: *M.Sc/M.Tech Molecular biology, Biochemistry, bioinformatics
or any area of Life Science with good academic standing with desirable
experience. Candidates should have qualified with *NET and Gate *
Place of working: The University of Trans-Disciplinary Health Sciences and
Technology (TDU)
Funding Agency: SERB, DST, Govt. of India
Duration: 1 year
Fellowship: As per SERB, DST norms
Skills sets required
· Molecular and biochemical techniques
· Experience in RNA isolation, Synthesis of cDNA. PCR, RT-PCR,
qPCR, cloning and transformation.
· Bioinformatics: transcriptome analysis
*Project 2: on “Genomics and population genetics of forest tree species Red
sander”*
*1.JRF/PhD position at TDU (1) under Dr. Mohana Kuamra P *
*Duration: *2 years *Fellowship: *As per DBT norms, Rs. 31,000/- per month
+ HRA
*Eligibility: *M.Sc/M.Tech in Bioinformatics, Molecular biology or any area
of Life Science with good academic standing with desirable experience.
Candidates should have qualified with *NET and Gate *
*Desirable Qualification: *Research interests/experience in molecular
biology, biotechnology, bioinformatics and basic knowledge in plant Biology
is essential.
*Job requirements: *
· Field collection of samples from Eastern Ghats and Western Ghats
· DNA and RNA isolation of different populations of collected
· Genomic and transcritptome sequencing. SSR SNP and EST analysis
· insilico analysis of polymorphic markers, Genotyping and metabolic
pathways analysis
· Candidate should work between the labs of IWST and TDU
· Establishing the Bioinformatic lab and analysis
· Report/book/manuscript writing
*The candidates are expected to have the following **experience*
· Experience in molecular biology techniques and in field biology
work.
· Experience in Next generation sequencing analysis of DNA and RNA-seq
data
· Ability to analyse raw primary data generated by Illumina next
generation sequencing platform and create troubleshoot custom analysis
pipelines.
· Primer design and restriction mapping
Ability to handle all downstream secondary and tertiary data analysis using
commercially available as well as open source software
· Apart from these, the applicant should have knowledge of the
following: scripting language: R, perl and/or Python
· Operating system: Unix and Windows
· Exposure to NGS Analysis tools like: BWA, Bowtie, SAM tools,
BEDTools, Galaxy, Tophat Cufflinks, FastQC, Trimgalore, Trinity,
RSEM,edgeR, DESeq,understanding of Statistics using: Microsoft Excel and R
· Genome Browser: Ensemble, JBrowser, IGV
10. Ability to use SNPs, repeats analysis and Population StudyAnalysis
Tools like: MIcroSAtellite Identification (MISA), VarScan, RepeatModeler,
RepeatMasker, Functional Annotation Tools: Trinotate, MAKER-P, Augustus,
Blast2GO, TargetP etc.
11. Familiar with population genetic analysis tools: ARLEQUIN
<http://anthropologie.unige.ch/arlequin/> , POPGENE
<http://www.ualberta.ca/~fyeh/index.htm>, BOTTLENEC, DNASP
<http://www.ub.es/dnasp/>, FSTAT
<http://www.unil.ch/izea/softwares/fstat.html>, LAMARC
<http://evolution.genetics.washington.edu/lamarc.html>, STRUCTURE
<http://pritch.bsd.uchicago.edu/software.html>etc and Phylogenetic
analysis:MEGA <http://www.megasoftware.net/>, PHYLIP, PAUP* 4.0
<http://paup.csit.fsu.edu/>CLUSTAL
<http://www.csc.fi/molbio/progs/clustalw/>etc
*Project 3: Development of sustainable technology for the production of
anticancer chromone alkaloids, rohitukine and dysoline from Indian forest
trees" *
*Duration: *2 years *Fellowship: *As per DBT norms, Rs. 31,000/- per month
+ HRA, Extendable to 3rd year
Work Place: Sirsi, Karnataka. Also ready to work between two labs COF,
Sirsi and TDU, Bengaluru
*Eligibility: M. Sc in life sciences with NET and Gate qualifications*
*1.JRF/PhD one position at Forestry college, Sirsi , Co-PI: Dr. Jagadesh
(1)*
*Job requirements/** Skills sets required *
· Field collection of samples from Western Ghats
· Field work and Cultivation of plant species in agro-forestry mode.
· Molecular and biochemical techniques
· Botany and molecular phylogeny
· Isolation and purification metabolites
· GIS and Niche modelling
· Data mining
· Selected candidate should work between the labs of TDU and Forest
college, Sirsi
· Report/book/manuscript writing
*To apply: *Interested candidates may submit their detailed CV with the
subject line, “JRF for DBT-SERB-NBA project” to the Principal
Investigator, Dr. Mohana Kumara P, Associate Professor, TDU, Bengaluru,
*mohan.kumar@xxxxxxxxxx* <mohan.kumar@xxxxxxxxxx>* Last date for submitting
CV; 31 January 2021*
--
*Dr. Mohana Kumara P*
*Associate Professor*
Centre for Ayurveda Biology and Holistic Nutrition (CABHN) at TDU:
Multi-omics lab
http://tdu.edu.in/home/cab/ ;<http://www.tdu.edu.in/genomics>
https://mohanmultiomics.wordpress.com/
*The *
*University of Trans-Disciplinary Health Sciences and Technology (TDU)*
tdu.edu.in <http://www.tdu.edu.in/> Ph; +91-80-28568000, Extn;153/144;
+91-80-28568878
Phone:91-9790464058